Figure 4
From: cWords - systematic microRNA regulatory motif discovery from mRNA expression data
Word enrichment of Argonaute bound mRNAs. (A) cWords word cluster plot showing 7mer 3′UTR words correlated with Argonaute binding in HEK293 cells. The top ten words are annotated with identifiers of the most abundant (top 20) miRNAs in HEK293 cells when the word and miRNA seed sequence (6 or 7mer) are complementary. (B) List of the 20 most abundant miRNAs in HEK293 cells, listing expression (relative clone frequency) and seed site (position 2 to 8) for each miRNA.